Proforma v2

Proforma v2 in DocProc [handling editor: Sylvie Ricard-Blum]

The specification document, ProForma (Proteoform and Peptidoform Notation (version 2.0.0, draft 12) has been submitted to the PSI document process.

After having passed a 30-day review of the PSI steering group with minor changes, the proposed document version 2.0.0 DRAFT now goes through 60-day public comments and external review phase until February 27th, 2021.

ProForma v2 aims to standardise the representation of proteoforms/peptidoforms supporting the main proteomics approaches, including both bottom-up (focused on peptides/peptidoforms) and top down (focused on proteins/proteoforms) approaches.

Specification document: ProForma_v2_draft12_0.docx, ProForma_v2_draft12_0.pdf

Use case examples: https://github.com/HUPO-PSI/ProForma/

Development background: https://github.com/HUPO-PSI/ProForma

 

Please send comments by e-mail directly to sylvie.ricard-blum at univ-lyon1.fr

for example regarding the following criteria:

  • That the specification is presented in accordance with the templates and is clearly written.
  • That it is sufficiently detailed and comprehensively describes the necessary and sufficient explanation of the specification.

If you do not feel experienced enough to comment on this document, but know colleagues who are, please consider forwarding this request to them.
There is no requirement that people commenting should have had any prior contact with the PSI.

 

Thank you very much in advance for your valuable time and participation

Sylvie RICARD-BLUM - PSI Editor